Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative sugar-specific permease, sgat/ulaa | HMPREF3040_03081 | Not Available | Positive | 2993436 - 2994833 | 50687.5 |
| pts system, lactose/cellobiose specific iib subunit | HMPREF3040_03082 | Not Available | Positive | 2994849 - 2995154 | 10838.2 |
| phosphoenolpyruvate-dependent sugar phosphotransferase system, eiia 2 | HMPREF3040_03083 | Not Available | Positive | 2995164 - 2995628 | 17237.5 |
| putative 3-dehydro-l-gulonate-6-phosphate decarboxylase | HMPREF3040_03084 | Not Available | Positive | 2995654 - 2996292 | 23236.8 |
| putative hexulose-6-phosphate isomerase | HMPREF3040_03085 | Not Available | Positive | 2996302 - 2997156 | 32066.4 |
| l-ribulose-5-phosphate 4-epimerase | HMPREF3040_03086 | Not Available | Positive | 2997156 - 2997842 | 25355.2 |
| hypothetical protein | HMPREF3040_03087 | Not Available | Negative | 2997972 - 2998316 | 12785.0 |
| ribosomal protein s6 | HMPREF3040_03088 | Not Available | Positive | 2998574 - 2998969 | 15217.9 |
| single-strand binding family protein | HMPREF3040_03089 | Not Available | Positive | 2998976 - 2999290 | 11472.9 |
| ribosomal protein s18 | HMPREF3040_03090 | Not Available | Positive | 2999295 - 2999522 | 8986.94 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





