Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-2-macroglobulin family protein | HMPREF3040_02991 | Not Available | Negative | 2893997 - 2898511 | 166672.0 |
| hypothetical protein | HMPREF3040_02992 | Not Available | Negative | 2898535 - 2899158 | 23752.5 |
| hypothetical protein | HMPREF3040_02993 | Not Available | Negative | 2899155 - 2900843 | 62657.8 |
| dna gyrase, a subunit | HMPREF3040_02994 | Not Available | Negative | 2900992 - 2903619 | 96983.3 |
| 3-demethylubiquinone-9 3-o-methyltransferase | HMPREF3040_02995 | Not Available | Positive | 2903718 - 2904488 | 28272.2 |
| outer membrane autotransporter barrel domain protein | HMPREF3040_02996 | Not Available | Negative | 2904549 - 2908262 | 129591.0 |
| hypothetical protein | HMPREF3040_02997 | Not Available | Positive | 2908607 - 2908759 | 5685.0 |
| ribonucleoside-diphosphate reductase, alpha subunit | HMPREF3040_02998 | Not Available | Positive | 2908958 - 2911243 | 85722.9 |
| hth-type transcriptional regulator adiy family protein | HMPREF3040_02999 | Not Available | Negative | 2911801 - 2912351 | 21012.7 |
| hypothetical protein | HMPREF3040_03000 | Not Available | Positive | 2912587 - 2912706 | 4279.45 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





