Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c-type protein napc | HMPREF3040_02960 | Not Available | Negative | 2862399 - 2863001 | 23101.8 |
| periplasmic nitrate reductase, diheme cytochrome c subunit | HMPREF3040_02961 | Not Available | Negative | 2863011 - 2863481 | 17091.4 |
| ferredoxin-type protein naph | HMPREF3040_02962 | Not Available | Negative | 2863457 - 2864320 | 31889.4 |
| ferredoxin-type protein napg | HMPREF3040_02963 | Not Available | Negative | 2864307 - 2865002 | 24926.1 |
| periplasmic nitrate reductase, large subunit | HMPREF3040_02964 | Not Available | Negative | 2865009 - 2867495 | 93061.0 |
| napd protein | HMPREF3040_02965 | Not Available | Negative | 2867492 - 2867755 | 9469.03 |
| ferredoxin-type protein napf | HMPREF3040_02966 | Not Available | Negative | 2867745 - 2868239 | 18061.4 |
| hypothetical protein | HMPREF3040_02967 | Not Available | Positive | 2868348 - 2868512 | 6159.48 |
| ecotin | HMPREF3040_02968 | Not Available | Positive | 2868626 - 2869135 | 19026.1 |
| malate dehydrogenase | HMPREF3040_02969 | Not Available | Negative | 2869283 - 2870929 | 60247.1 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





