Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside permease nupx | HMPREF3040_02920 | Not Available | Negative | 2822200 - 2823450 | 43390.3 |
| tat pathway signal sequence domain protein | HMPREF3040_02921 | Not Available | Negative | 2823544 - 2824482 | 32878.7 |
| kinase, pfkb family | HMPREF3040_02922 | Not Available | Negative | 2824470 - 2825411 | 33708.0 |
| pts system fructose-specific eiibbc component | HMPREF3040_02923 | Not Available | Negative | 2825835 - 2827526 | 57508.6 |
| 1-phosphofructokinase | HMPREF3040_02924 | Not Available | Negative | 2827543 - 2828481 | 33757.6 |
| multiphosphoryl transfer protein | HMPREF3040_02925 | Not Available | Negative | 2828481 - 2829611 | 39650.2 |
| hypothetical protein | HMPREF3040_02926 | Not Available | Positive | 2829777 - 2829908 | 5261.2 |
| sugar efflux transporter b | HMPREF3040_02927 | Not Available | Positive | 2829979 - 2831160 | 42706.6 |
| hypothetical protein | HMPREF3040_02928 | Not Available | Negative | 2831157 - 2831345 | 6817.32 |
| elongation factor p | HMPREF3040_02929 | Not Available | Positive | 2831566 - 2832138 | 21533.9 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





