Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| redoxin family protein | HMPREF3040_02890 | Not Available | Positive | 2799504 - 2799989 | 17670.4 |
| hypothetical protein | HMPREF3040_02891 | Not Available | Positive | 2800014 - 2800499 | 18607.2 |
| hypothetical protein | HMPREF3040_02892 | Not Available | Positive | 2800477 - 2800599 | 4662.63 |
| glucose-1-phosphatase domain protein | HMPREF3040_02893 | Not Available | Positive | 2800621 - 2801070 | 16139.2 |
| hypothetical protein | HMPREF3040_02894 | Not Available | Positive | 2801054 - 2801365 | 11545.5 |
| ispsy2, transposase family protein | HMPREF3040_02895 | Not Available | Negative | 2801404 - 2801610 | 8083.06 |
| reverse transcriptase | HMPREF3040_02896 | Not Available | Positive | 2801611 - 2802837 | 47513.7 |
| integrase core domain protein | HMPREF3040_02897 | Not Available | Positive | 2802954 - 2803288 | 12472.8 |
| hypothetical protein | HMPREF3040_02898 | Not Available | Negative | 2803289 - 2803725 | 16237.8 |
| hypothetical protein | HMPREF3040_02899 | Not Available | Negative | 2803767 - 2803892 | 4935.06 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





