Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_02880 | Not Available | Positive | 2790475 - 2790633 | 5488.69 |
| antioxidant, ahpc/tsa family | HMPREF3040_02881 | Not Available | Positive | 2790623 - 2791129 | 18906.0 |
| nadh:ubiquinone oxidoreductase, na(+)-translocating, c subunit | HMPREF3040_02882 | Not Available | Positive | 2791366 - 2792127 | 28433.2 |
| hypothetical protein | HMPREF3040_02883 | Not Available | Negative | 2792201 - 2792341 | 4946.82 |
| ftr1 family protein | HMPREF3040_02884 | Not Available | Positive | 2792474 - 2794360 | 70160.5 |
| hypothetical protein | HMPREF3040_02885 | Not Available | Positive | 2794401 - 2794928 | 19225.1 |
| yhs domain protein | HMPREF3040_02886 | Not Available | Positive | 2795032 - 2796411 | 51008.0 |
| efflux abc transporter, permease protein | HMPREF3040_02887 | Not Available | Positive | 2796414 - 2797697 | 46201.3 |
| efflux abc transporter, permease protein | HMPREF3040_02888 | Not Available | Positive | 2797687 - 2798817 | 40970.7 |
| abc transporter, atp-binding protein | HMPREF3040_02889 | Not Available | Positive | 2798822 - 2799517 | 25575.7 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





