Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_02859 | Not Available | Negative | 2767112 - 2767234 | 4451.59 |
| sorbitol operon regulator | HMPREF3040_02860 | Not Available | Positive | 2767283 - 2768251 | 35705.7 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | HMPREF3040_02861 | Not Available | Positive | 2768321 - 2769127 | 29010.6 |
| pts system fructose iia component | HMPREF3040_02862 | Not Available | Positive | 2769137 - 2769544 | 14878.9 |
| sorbose-specific phosphotransferase enzyme iib component | HMPREF3040_02863 | Not Available | Positive | 2769544 - 2770038 | 18463.3 |
| mannose permease iic component | HMPREF3040_02864 | Not Available | Positive | 2770104 - 2770901 | 27962.0 |
| mannose permease iid component | HMPREF3040_02865 | Not Available | Positive | 2770912 - 2771736 | 29499.9 |
| groes-like protein | HMPREF3040_02866 | Not Available | Positive | 2771776 - 2773017 | 45352.0 |
| hypothetical protein | HMPREF3040_02867 | Not Available | Positive | 2773087 - 2773362 | 10553.8 |
| asp-specific dipeptidase | HMPREF3040_02868 | Not Available | Positive | 2773399 - 2774088 | 24571.7 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





