Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane multidrug efflux protein bpeb | HMPREF3040_02799 | Not Available | Positive | 2704804 - 2707917 | 113068.0 |
| transcriptional regulator, spx/mgsr family | HMPREF3040_02800 | Not Available | Positive | 2708456 - 2708812 | 13557.3 |
| succinyl-diaminopimelate desuccinylase | HMPREF3040_02801 | Not Available | Positive | 2708816 - 2709943 | 41255.4 |
| hypothetical protein | HMPREF3040_02802 | Not Available | Positive | 2709947 - 2710171 | 9001.93 |
| phospholipase/carboxylesterase | HMPREF3040_02803 | Not Available | Negative | 2710252 - 2710974 | 25723.6 |
| putative atpase duf699 | HMPREF3040_02804 | Not Available | Negative | 2711024 - 2713039 | 74997.8 |
| putative neutral zinc metallopeptidase | HMPREF3040_02805 | Not Available | Negative | 2713054 - 2713848 | 28817.1 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | HMPREF3040_02806 | Not Available | Negative | 2714085 - 2714798 | 26996.5 |
| lipoprotein 34 | HMPREF3040_02807 | Not Available | Negative | 2715011 - 2716045 | 36844.5 |
| dihydrodipicolinate synthase | HMPREF3040_02808 | Not Available | Negative | 2716062 - 2716940 | 31285.9 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





