Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ethanolamine utilization protein, eutp | HMPREF3040_02789 | Not Available | Negative | 2692179 - 2692658 | 17689.8 |
| bmc domain protein | HMPREF3040_02790 | Not Available | Negative | 2692671 - 2693006 | 11666.3 |
| malate dehydrogenase | HMPREF3040_02791 | Not Available | Negative | 2693299 - 2695578 | 82432.2 |
| transaldolase | HMPREF3040_02792 | Not Available | Positive | 2695867 - 2696817 | 35660.7 |
| transketolase | HMPREF3040_02793 | Not Available | Positive | 2696837 - 2698840 | 73027.8 |
| hypothetical protein | HMPREF3040_02794 | Not Available | Negative | 2698943 - 2699986 | 38706.4 |
| gdp-mannose pyrophosphatase nudk | HMPREF3040_02795 | Not Available | Negative | 2700112 - 2700687 | 21733.9 |
| putative oxidoreductase fe-s binding subunit | HMPREF3040_02797 | Not Available | Negative | 2700755 - 2702431 | 60699.6 |
| hypothetical protein | HMPREF3040_02796 | Not Available | Positive | 2702426 - 2702758 | 12110.9 |
| nitrate/nitrite sensor protein narq | HMPREF3040_02798 | Not Available | Positive | 2702925 - 2704640 | 64303.5 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





