Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_02746 | Not Available | Negative | 2639713 - 2640567 | 31554.8 |
| inositol monophosphatase family protein | HMPREF3040_02747 | Not Available | Negative | 2640712 - 2641506 | 28808.3 |
| rna methyltransferase, trmh family, group 1 | HMPREF3040_02748 | Not Available | Positive | 2641634 - 2642374 | 27049.6 |
| iron-sulfur cluster assembly transcription factor iscr | HMPREF3040_02749 | Not Available | Positive | 2642644 - 2643132 | 17337.6 |
| cysteine desulfurase iscs | HMPREF3040_02750 | Not Available | Positive | 2643223 - 2644458 | 45933.2 |
| fes cluster assembly scaffold iscu | HMPREF3040_02751 | Not Available | Positive | 2644486 - 2644872 | 13849.3 |
| iron-sulfur cluster assembly protein isca | HMPREF3040_02752 | Not Available | Positive | 2644889 - 2645212 | 11556.7 |
| fe-s protein assembly co-chaperone hscb | HMPREF3040_02753 | Not Available | Positive | 2645308 - 2645823 | 20138.8 |
| fe-s protein assembly chaperone hsca | HMPREF3040_02754 | Not Available | Positive | 2645840 - 2647690 | 65732.4 |
| ferredoxin, 2fe-2s type, isc system | HMPREF3040_02755 | Not Available | Positive | 2647692 - 2648027 | 12359.5 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





