Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-e factor regulatory protein rseb | HMPREF3040_02705 | Not Available | Positive | 2596153 - 2597109 | 35751.8 |
| sigma-e factor regulatory protein rsec | HMPREF3040_02706 | Not Available | Positive | 2597106 - 2597585 | 16597.3 |
| gtp-binding protein lepa | HMPREF3040_02707 | Not Available | Positive | 2597783 - 2599582 | 66574.1 |
| signal peptidase i | HMPREF3040_02708 | Not Available | Positive | 2599598 - 2600572 | 35948.3 |
| ribosome biogenesis gtpase era | HMPREF3040_02709 | Not Available | Positive | 2601522 - 2602427 | 33798.1 |
| dna repair protein reco | HMPREF3040_02710 | Not Available | Positive | 2602439 - 2603167 | 27364.1 |
| pyridoxine 5'-phosphate synthase | HMPREF3040_02711 | Not Available | Positive | 2603164 - 2603910 | 27030.8 |
| holo-[acyl-carrier-protein] synthase | HMPREF3040_02712 | Not Available | Positive | 2603910 - 2604290 | 14111.2 |
| ferredoxin | HMPREF3040_02713 | Not Available | Negative | 2604985 - 2605245 | 9848.85 |
| transcriptional regulator, rpir family | HMPREF3040_02714 | Not Available | Negative | 2605301 - 2606149 | 30709.3 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





