Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase, a24 family | HMPREF3040_02655 | Not Available | Negative | 2565448 - 2565915 | 17035.1 |
| ribosomal protein s10 | HMPREF3040_02656 | Not Available | Positive | 2566294 - 2566605 | 11736.3 |
| 50s ribosomal protein l3 | HMPREF3040_02657 | Not Available | Positive | 2566638 - 2567267 | 22244.8 |
| 50s ribosomal protein l4 | HMPREF3040_02658 | Not Available | Positive | 2567278 - 2567883 | 22087.8 |
| ribosomal protein l23 | HMPREF3040_02659 | Not Available | Positive | 2567880 - 2568182 | 11199.8 |
| ribosomal protein l2 | HMPREF3040_02660 | Not Available | Positive | 2568200 - 2569021 | 29862.3 |
| ribosomal protein s19 | HMPREF3040_02661 | Not Available | Positive | 2569038 - 2569316 | 10430.9 |
| ribosomal protein l22 | HMPREF3040_02662 | Not Available | Positive | 2569331 - 2569663 | 12227.0 |
| ribosomal protein s3 | HMPREF3040_02663 | Not Available | Positive | 2569681 - 2570382 | 25984.8 |
| ribosomal protein l16 | HMPREF3040_02664 | Not Available | Positive | 2570395 - 2570805 | 15282.1 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





