Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron(3+)-hydroxamate import system permease protein fhub | HMPREF3040_02594 | Not Available | Positive | 2509743 - 2511725 | 70396.6 |
| glutamate-1-semialdehyde-2,1-aminomutase | HMPREF3040_02595 | Not Available | Negative | 2511760 - 2513040 | 45372.7 |
| h(+)/cl(-) exchange transporter clca | HMPREF3040_02596 | Not Available | Positive | 2513265 - 2514686 | 50351.9 |
| iron-sulfur cluster insertion protein erpa | HMPREF3040_02597 | Not Available | Positive | 2514768 - 2515112 | 12101.2 |
| hypothetical protein | HMPREF3040_02598 | Not Available | Negative | 2515159 - 2515782 | 22129.1 |
| vitamin b12-binding protein | HMPREF3040_02599 | Not Available | Negative | 2515820 - 2516620 | 29352.4 |
| mta/sah nucleosidase | HMPREF3040_02600 | Not Available | Negative | 2516613 - 2517311 | 24355.4 |
| dgtpase | HMPREF3040_02601 | Not Available | Positive | 2517395 - 2518912 | 59335.1 |
| peptidase do | HMPREF3040_02602 | Not Available | Positive | 2519042 - 2520466 | 49357.3 |
| carbohydrate diacid regulator | HMPREF3040_02603 | Not Available | Positive | 2520621 - 2521778 | 43660.1 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





