Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonate dehydratase | HMPREF3040_02564 | Not Available | Negative | 2480673 - 2481335 | 25098.2 |
| abc transporter, atp-binding protein | HMPREF3040_02565 | Not Available | Positive | 2481444 - 2482370 | 34649.2 |
| abc-2 type transporter | HMPREF3040_02566 | Not Available | Positive | 2482367 - 2483137 | 28517.9 |
| pts system fructose iia component | HMPREF3040_02567 | Not Available | Positive | 2483242 - 2483682 | 16591.1 |
| polysaccharide deacetylase | HMPREF3040_02568 | Not Available | Positive | 2483746 - 2484975 | 46368.9 |
| aspartate 1-decarboxylase | HMPREF3040_02569 | Not Available | Negative | 2484979 - 2485359 | 13834.5 |
| hypothetical protein | HMPREF3040_02570 | Not Available | Negative | 2485452 - 2485610 | 6200.72 |
| hypothetical protein | HMPREF3040_02571 | Not Available | Positive | 2485633 - 2486438 | 31251.6 |
| hypothetical protein | HMPREF3040_02572 | Not Available | Positive | 2486577 - 2486728 | 6031.43 |
| hypothetical protein | HMPREF3040_02573 | Not Available | Positive | 2486729 - 2486894 | 6193.29 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





