Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_02554 | Not Available | Negative | 2468206 - 2470059 | 69375.6 |
| aconitate hydratase 2 | HMPREF3040_02555 | Not Available | Positive | 2470387 - 2473011 | 94560.8 |
| hypothetical protein | HMPREF3040_02556 | Not Available | Negative | 2473027 - 2473206 | 6553.27 |
| hypothetical protein | HMPREF3040_02557 | Not Available | Positive | 2473208 - 2473570 | 13942.3 |
| s-adenosylmethionine decarboxylase proenzyme | HMPREF3040_02558 | Not Available | Negative | 2473608 - 2474402 | 30386.3 |
| spermidine synthase | HMPREF3040_02559 | Not Available | Negative | 2474418 - 2475284 | 32309.1 |
| hypothetical protein | HMPREF3040_02561 | Not Available | Negative | 2475390 - 2475908 | 19475.6 |
| blue copper oxidase cueo | HMPREF3040_02560 | Not Available | Positive | 2475903 - 2477453 | 56633.7 |
| quinoprotein glucose dehydrogenase | HMPREF3040_02562 | Not Available | Negative | 2477500 - 2479890 | 86766.1 |
| hypoxanthine phosphoribosyltransferase | HMPREF3040_02563 | Not Available | Positive | 2480084 - 2480632 | 20618.1 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





