Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase, small subunit | HMPREF3040_02514 | Not Available | Positive | 2426527 - 2426883 | 13077.0 |
| hypothetical protein | HMPREF3040_02515 | Not Available | Positive | 2426935 - 2427066 | 5095.11 |
| fructose repressor | HMPREF3040_02516 | Not Available | Positive | 2427063 - 2428067 | 38001.5 |
| hypothetical protein | HMPREF3040_02517 | Not Available | Positive | 2428388 - 2428522 | 5328.73 |
| protein mraz | HMPREF3040_02518 | Not Available | Positive | 2428633 - 2429127 | 18603.6 |
| s-adenosyl-methyltransferase mraw | HMPREF3040_02519 | Not Available | Positive | 2429129 - 2430070 | 34922.0 |
| cell division protein ftsl | HMPREF3040_02520 | Not Available | Positive | 2430067 - 2430432 | 13627.7 |
| peptidoglycan synthetase ftsi | HMPREF3040_02521 | Not Available | Positive | 2430448 - 2432214 | 63881.2 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | HMPREF3040_02522 | Not Available | Positive | 2432273 - 2433688 | 50581.2 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | HMPREF3040_02523 | Not Available | Positive | 2433685 - 2435043 | 47377.8 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





