Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator sgrr | HMPREF3040_02503 | Not Available | Negative | 2415898 - 2417439 | 59694.4 |
| 3-isopropylmalate dehydratase, small subunit | HMPREF3040_02505 | Not Available | Negative | 2417884 - 2418489 | 22604.8 |
| 3-isopropylmalate dehydratase, large subunit | HMPREF3040_02506 | Not Available | Negative | 2418500 - 2419900 | 49912.8 |
| 3-isopropylmalate dehydrogenase | HMPREF3040_02507 | Not Available | Negative | 2419903 - 2420994 | 39502.2 |
| 2-isopropylmalate synthase | HMPREF3040_02508 | Not Available | Negative | 2420994 - 2422565 | 57317.2 |
| hypothetical protein | HMPREF3040_02509 | Not Available | Negative | 2422782 - 2422913 | 4918.21 |
| leucine transcriptional activator | HMPREF3040_02510 | Not Available | Positive | 2423403 - 2424347 | 35696.7 |
| hypothetical protein | HMPREF3040_02512 | Not Available | Negative | 2424371 - 2424505 | 5146.31 |
| hypothetical protein | HMPREF3040_02511 | Not Available | Positive | 2424480 - 2424605 | 4742.17 |
| acetolactate synthase, large subunit | HMPREF3040_02513 | Not Available | Positive | 2424581 - 2426389 | 66189.1 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





