Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_02463 | Not Available | Negative | 2372713 - 2372931 | 8212.92 |
| transcriptional activatory protein caif | HMPREF3040_02464 | Not Available | Positive | 2372966 - 2373361 | 15437.1 |
| bacterial transferase hexapeptide repeat protein | HMPREF3040_02465 | Not Available | Negative | 2373567 - 2374178 | 22007.7 |
| carnitinyl-coa dehydratase | HMPREF3040_02466 | Not Available | Negative | 2374163 - 2374987 | 29749.8 |
| putative crotonobetaine/carnitine-coa ligase | HMPREF3040_02467 | Not Available | Negative | 2375057 - 2376625 | 59125.1 |
| crotonobetainyl-coa:carnitine coa-transferase | HMPREF3040_02468 | Not Available | Negative | 2376684 - 2377901 | 45071.2 |
| crotonobetainyl-coa dehydrogenase | HMPREF3040_02469 | Not Available | Negative | 2378030 - 2379172 | 42560.8 |
| l-carnitine/gamma-butyrobetaine antiporter | HMPREF3040_02470 | Not Available | Negative | 2379203 - 2380717 | 56590.4 |
| hypothetical protein | HMPREF3040_02471 | Not Available | Positive | 2380833 - 2380982 | 5519.78 |
| putative electron transfer flavoprotein fixa | HMPREF3040_02472 | Not Available | Positive | 2381154 - 2381960 | 28455.8 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





