Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoleucine--trna ligase | HMPREF3040_02453 | Not Available | Positive | 2361099 - 2363915 | 104270.0 |
| signal peptidase ii | HMPREF3040_02454 | Not Available | Positive | 2363915 - 2364409 | 18129.3 |
| peptidyl-prolyl cis-trans isomerase, fkbp-type, subunit | HMPREF3040_02455 | Not Available | Positive | 2364496 - 2364945 | 16081.9 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | HMPREF3040_02456 | Not Available | Positive | 2364947 - 2365897 | 34776.6 |
| non-specific ribonucleoside hydrolase rihc | HMPREF3040_02457 | Not Available | Positive | 2365963 - 2366877 | 32584.8 |
| dihydrodipicolinate reductase | HMPREF3040_02458 | Not Available | Positive | 2367044 - 2367865 | 28758.3 |
| hypothetical protein | HMPREF3040_02459 | Not Available | Negative | 2367877 - 2368059 | 7133.1 |
| hypothetical protein | HMPREF3040_02460 | Not Available | Positive | 2368144 - 2368281 | 5124.31 |
| carbamoyl-phosphate synthase, small subunit | HMPREF3040_02461 | Not Available | Positive | 2368294 - 2369469 | 42469.6 |
| carbamoyl-phosphate synthase, large subunit | HMPREF3040_02462 | Not Available | Positive | 2369487 - 2372705 | 117822.0 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





