Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein cred | HMPREF3040_02423 | Not Available | Positive | 2330835 - 2332187 | 49916.9 |
| aerobic respiration control protein arca | HMPREF3040_02424 | Not Available | Negative | 2332247 - 2332963 | 27293.6 |
| rna methyltransferase, trmh family, group 1 | HMPREF3040_02425 | Not Available | Positive | 2333599 - 2334285 | 25274.6 |
| hypothetical protein | HMPREF3040_02426 | Not Available | Positive | 2334263 - 2334385 | 4698.65 |
| homoserine dehydrogenase | HMPREF3040_02427 | Not Available | Positive | 2334645 - 2337107 | 89084.5 |
| homoserine kinase | HMPREF3040_02428 | Not Available | Positive | 2337109 - 2338041 | 33581.5 |
| threonine synthase | HMPREF3040_02429 | Not Available | Positive | 2338042 - 2339328 | 47135.6 |
| hypothetical protein | HMPREF3040_02430 | Not Available | Negative | 2339618 - 2339965 | 12406.6 |
| hypothetical protein | HMPREF3040_02431 | Not Available | Negative | 2339991 - 2340767 | 29574.5 |
| amino acid carrier protein | HMPREF3040_02432 | Not Available | Negative | 2340837 - 2342267 | 51649.9 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





