Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette protein, chvd family | HMPREF3040_02413 | Not Available | Negative | 2321662 - 2323308 | 61605.4 |
| soluble lytic murein transglycosylase | HMPREF3040_02414 | Not Available | Positive | 2323513 - 2325477 | 74420.4 |
| trp operon repressor | HMPREF3040_02415 | Not Available | Positive | 2325567 - 2325893 | 12406.0 |
| inosine/xanthosine triphosphatase | HMPREF3040_02416 | Not Available | Negative | 2325887 - 2326411 | 18752.4 |
| phosphoglycerate mutase | HMPREF3040_02417 | Not Available | Positive | 2326454 - 2327101 | 24066.7 |
| right origin-binding protein | HMPREF3040_02418 | Not Available | Negative | 2327098 - 2327967 | 33146.8 |
| hypothetical protein | HMPREF3040_02419 | Not Available | Negative | 2327977 - 2328120 | 5203.61 |
| protein crea | HMPREF3040_02420 | Not Available | Positive | 2328178 - 2328651 | 17108.8 |
| response regulator receiver domain protein | HMPREF3040_02421 | Not Available | Positive | 2328664 - 2329353 | 26156.8 |
| sensor protein crec | HMPREF3040_02422 | Not Available | Positive | 2329353 - 2330777 | 52216.4 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





