Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_02393 | Not Available | Positive | 2305072 - 2305320 | 8999.87 |
| glycine radical enzyme, yjji family | HMPREF3040_02395 | Not Available | Negative | 2305310 - 2306860 | 58022.3 |
| hypothetical protein | HMPREF3040_02394 | Not Available | Positive | 2306836 - 2306961 | 4948.95 |
| deoxyribose-phosphate aldolase | HMPREF3040_02396 | Not Available | Positive | 2307118 - 2307897 | 27735.3 |
| hypothetical protein | HMPREF3040_02397 | Not Available | Negative | 2307966 - 2308094 | 4571.58 |
| thymidine phosphorylase | HMPREF3040_02398 | Not Available | Positive | 2308123 - 2309445 | 47182.9 |
| phosphopentomutase | HMPREF3040_02399 | Not Available | Positive | 2309497 - 2310720 | 44372.4 |
| purine nucleoside phosphorylase | HMPREF3040_02400 | Not Available | Positive | 2310720 - 2311496 | 27972.0 |
| hypothetical protein | HMPREF3040_02401 | Not Available | Negative | 2311680 - 2311907 | 8799.89 |
| lipoate--protein ligase | HMPREF3040_02402 | Not Available | Negative | 2311939 - 2312955 | 37863.8 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





