Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative glycosyl transferase | HMPREF3040_02372 | Not Available | Negative | 2281362 - 2282579 | 45345.7 |
| bacterial transferase hexapeptide repeat protein | HMPREF3040_02373 | Not Available | Negative | 2282576 - 2283016 | 15740.3 |
| glycosyltransferase, group 2 family protein | HMPREF3040_02374 | Not Available | Negative | 2283067 - 2283906 | 33064.6 |
| putative tyrosine-protein kinase ptk | HMPREF3040_02375 | Not Available | Negative | 2283999 - 2286161 | 79346.7 |
| low molecular weight protein-tyrosine-phosphatase etp | HMPREF3040_02376 | Not Available | Negative | 2286164 - 2286607 | 16655.2 |
| amylovoran export outer membrane protein amsh | HMPREF3040_02377 | Not Available | Negative | 2286613 - 2287752 | 41912.4 |
| putative atp synthase f0, a subunit | HMPREF3040_02378 | Not Available | Positive | 2288411 - 2289994 | 59453.9 |
| toxin-antitoxin system, toxin component, rele family | HMPREF3040_02379 | Not Available | Positive | 2290069 - 2290407 | 13251.7 |
| dna-binding helix-turn-helix protein | HMPREF3040_02380 | Not Available | Positive | 2290397 - 2290687 | 10777.0 |
| asma family protein | HMPREF3040_02381 | Not Available | Negative | 2290740 - 2292593 | 68896.8 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





