Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphomannomutase | HMPREF3040_02362 | Not Available | Negative | 2272029 - 2273399 | 50458.5 |
| hypothetical protein | HMPREF3040_02363 | Not Available | Positive | 2273425 - 2273583 | 5765.95 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | HMPREF3040_02364 | Not Available | Negative | 2273592 - 2275028 | 52976.1 |
| glycosyltransferase, group 1 family protein | HMPREF3040_02365 | Not Available | Negative | 2275031 - 2276254 | 44876.6 |
| gdp-mannose mannosyl hydrolase | HMPREF3040_02366 | Not Available | Negative | 2276251 - 2276733 | 18397.7 |
| gdp-l-fucose synthetase | HMPREF3040_02367 | Not Available | Negative | 2276733 - 2277698 | 36213.4 |
| gdp-mannose 4,6-dehydratase | HMPREF3040_02368 | Not Available | Negative | 2277701 - 2278822 | 42049.2 |
| bacterial transferase hexapeptide repeat protein | HMPREF3040_02369 | Not Available | Negative | 2278849 - 2279397 | 20006.2 |
| glycosyltransferase, group 2 family protein | HMPREF3040_02370 | Not Available | Negative | 2279413 - 2280159 | 27868.4 |
| putative colanic acid biosynthesis protein | HMPREF3040_02371 | Not Available | Negative | 2280170 - 2281387 | 45412.2 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





