Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase, group 1 family protein | HMPREF3040_02352 | Not Available | Negative | 2261261 - 2262463 | 45884.5 |
| glycosyltransferase, group 1 family protein | HMPREF3040_02354 | Not Available | Negative | 2262456 - 2263460 | 38544.2 |
| hypothetical protein | HMPREF3040_02353 | Not Available | Positive | 2263459 - 2263581 | 4596.75 |
| regulatory protein galf | HMPREF3040_02355 | Not Available | Negative | 2263854 - 2264747 | 32857.2 |
| tat pathway signal sequence domain protein | HMPREF3040_02356 | Not Available | Negative | 2264922 - 2266316 | 51331.7 |
| glycosyltransferase, group 1 family protein | HMPREF3040_02357 | Not Available | Negative | 2266327 - 2267547 | 45357.2 |
| polysaccharide pyruvyl transferase | HMPREF3040_02358 | Not Available | Negative | 2267544 - 2268824 | 47353.4 |
| hypothetical protein | HMPREF3040_02359 | Not Available | Positive | 2268980 - 2269114 | 4903.86 |
| polysaccharide biosynthesis protein | HMPREF3040_02360 | Not Available | Negative | 2269100 - 2270578 | 53772.1 |
| undecaprenyl-phosphate glucose phosphotransferase | HMPREF3040_02361 | Not Available | Negative | 2270580 - 2271974 | 52397.5 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





