Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | HMPREF3040_02342 | Not Available | Positive | 2249245 - 2249982 | 26033.3 |
| imidazoleglycerol phosphate synthase, cyclase subunit | HMPREF3040_02343 | Not Available | Positive | 2249964 - 2250740 | 28459.0 |
| phosphoribosyl-atp diphosphatase | HMPREF3040_02344 | Not Available | Positive | 2250734 - 2251345 | 22727.0 |
| chain length determinant protein | HMPREF3040_02345 | Not Available | Negative | 2251528 - 2252508 | 36431.9 |
| nucleotide sugar dehydrogenase | HMPREF3040_02346 | Not Available | Negative | 2252651 - 2253817 | 43629.2 |
| phosphogluconate dehydrogenase | HMPREF3040_02347 | Not Available | Negative | 2254067 - 2255473 | 51441.1 |
| polysaccharide biosynthesis protein | HMPREF3040_02348 | Not Available | Negative | 2255626 - 2256861 | 46707.8 |
| hypothetical protein | HMPREF3040_02349 | Not Available | Negative | 2256903 - 2258054 | 43673.6 |
| phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain ii | HMPREF3040_02350 | Not Available | Negative | 2258418 - 2259866 | 52799.1 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | HMPREF3040_02351 | Not Available | Negative | 2259844 - 2261259 | 53137.3 |
Pathways
12920 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





