Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative glycerol dehydratase, small subunit | HMPREF3040_02312 | Not Available | Positive | 2223875 - 2224393 | 19356.9 |
| glycerol dehydratase reactivation factor, large subunit | HMPREF3040_02313 | Not Available | Positive | 2224403 - 2226235 | 64158.9 |
| propanediol utilization protein pduh | HMPREF3040_02314 | Not Available | Positive | 2226225 - 2226575 | 13005.8 |
| major carboxysome shell protein 1a | HMPREF3040_02315 | Not Available | Positive | 2226595 - 2226870 | 9054.02 |
| bmc domain protein | HMPREF3040_02316 | Not Available | Positive | 2226894 - 2227316 | 14396.5 |
| propanediol utilization protein pdul | HMPREF3040_02317 | Not Available | Positive | 2227319 - 2227951 | 22870.6 |
| hypothetical protein | HMPREF3040_02318 | Not Available | Positive | 2227948 - 2228439 | 18774.0 |
| ethanolamine utilization protein eutn/carboxysome structural protein ccml | HMPREF3040_02319 | Not Available | Positive | 2228443 - 2228718 | 9260.25 |
| atp:cob(i)alamin adenosyltransferase | HMPREF3040_02320 | Not Available | Positive | 2228730 - 2229737 | 36810.1 |
| aldehyde dehydrogenase family protein | HMPREF3040_02321 | Not Available | Positive | 2229734 - 2231119 | 49238.7 |
Pathways
12759 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





