Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | HMPREF3040_02302 | Not Available | Negative | 2214537 - 2215616 | 37003.4 |
| adenosylcobinamide-gdp ribazoletransferase | HMPREF3040_02303 | Not Available | Negative | 2215628 - 2216371 | 26413.3 |
| adenosylcobalamin biosynthesis protein cobu | HMPREF3040_02304 | Not Available | Negative | 2216368 - 2216991 | 23075.6 |
| hypothetical protein | HMPREF3040_02305 | Not Available | Negative | 2217046 - 2217483 | 15642.7 |
| transcriptional regulator, arac family | HMPREF3040_02306 | Not Available | Negative | 2217968 - 2218882 | 34715.6 |
| aquaglyceroporin | HMPREF3040_02307 | Not Available | Negative | 2219085 - 2219933 | 29561.7 |
| major carboxysome shell protein 1a | HMPREF3040_02308 | Not Available | Positive | 2220406 - 2220690 | 9570.74 |
| propanediol utilization protein pdub | HMPREF3040_02309 | Not Available | Positive | 2220687 - 2221499 | 28143.8 |
| glycerol dehydratase, large subunit | HMPREF3040_02310 | Not Available | Positive | 2221518 - 2223182 | 60431.8 |
| putative glycerol dehydratase, medium subunit | HMPREF3040_02311 | Not Available | Positive | 2223192 - 2223860 | 24157.2 |
Pathways
12929 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





