Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_02291 | Not Available | Negative | 2201497 - 2201688 | 6749.31 |
| hypothetical protein | HMPREF3040_02292 | Not Available | Positive | 2201767 - 2203656 | 70597.0 |
| hypothetical protein | HMPREF3040_02293 | Not Available | Positive | 2203666 - 2204412 | 29134.6 |
| hypothetical protein | HMPREF3040_02294 | Not Available | Negative | 2204417 - 2204569 | 5604.63 |
| hypothetical protein | HMPREF3040_02295 | Not Available | Negative | 2204606 - 2205553 | 34549.8 |
| hypothetical protein | HMPREF3040_02297 | Not Available | Negative | 2206611 - 2207636 | 39216.6 |
| hypothetical protein | HMPREF3040_02298 | Not Available | Negative | 2207675 - 2209459 | 68097.5 |
| hypothetical protein | HMPREF3040_02299 | Not Available | Negative | 2209456 - 2211021 | 59080.0 |
| n-6 dna methylase | HMPREF3040_02300 | Not Available | Negative | 2211018 - 2212691 | 63385.0 |
| protein erfk/srfk | HMPREF3040_02301 | Not Available | Negative | 2213540 - 2214373 | 30849.8 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





