Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysialic acid transport protein kpsm | HMPREF3040_02264 | Not Available | Positive | 2177712 - 2178488 | 29940.7 |
| putative atp-binding protein bexa | HMPREF3040_02265 | Not Available | Positive | 2178485 - 2179156 | 25600.0 |
| capsular polysaccharide phosphotransferase lcba family protein | HMPREF3040_02266 | Not Available | Positive | 2179160 - 2180251 | 43081.4 |
| cdp-glycerol:poly(glycerophosphate) glycerophosphotransferase | HMPREF3040_02267 | Not Available | Positive | 2180255 - 2183776 | 138881.0 |
| hypothetical protein | HMPREF3040_02268 | Not Available | Positive | 2184130 - 2185221 | 42195.0 |
| hypothetical protein | HMPREF3040_02269 | Not Available | Negative | 2185505 - 2185779 | 10063.6 |
| hypothetical protein | HMPREF3040_02270 | Not Available | Negative | 2185847 - 2187408 | 57093.6 |
| transposase, is4 family | HMPREF3040_02278 | Not Available | Positive | 2193600 - 2194928 | 50388.8 |
| hypothetical protein | HMPREF3040_02279 | Not Available | Positive | 2194942 - 2195505 | 21799.8 |
| type-f conjugative transfer system protein trbi | HMPREF3040_02280 | Not Available | Positive | 2195502 - 2195888 | 14163.0 |
Pathways
12740 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





