Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_02254 | Not Available | Positive | 2167126 - 2167368 | 9148.8 |
| hypothetical protein | HMPREF3040_02255 | Not Available | Positive | 2167453 - 2168295 | 32646.4 |
| hypothetical protein | HMPREF3040_02256 | Not Available | Negative | 2168533 - 2168826 | 11206.9 |
| hypothetical protein | HMPREF3040_02257 | Not Available | Negative | 2168976 - 2169110 | 5068.66 |
| sugar isomerase, kpsf/gutq family | HMPREF3040_02258 | Not Available | Positive | 2169618 - 2170601 | 35581.1 |
| polysaccharide export inner-membrane protein, bexc/ctrb/kpse family | HMPREF3040_02259 | Not Available | Positive | 2170673 - 2171821 | 43077.0 |
| polysialic acid transport protein kpsd | HMPREF3040_02260 | Not Available | Positive | 2171845 - 2173521 | 60317.3 |
| 3-deoxy-d-manno-octulosonate cytidylyltransferase | HMPREF3040_02261 | Not Available | Positive | 2173531 - 2174271 | 27252.8 |
| putative capsular polysaccharide biosynthesis protein wcba | HMPREF3040_02262 | Not Available | Positive | 2174268 - 2176295 | 75616.4 |
| capsule polysaccharide biosynthesis protein | HMPREF3040_02263 | Not Available | Positive | 2176330 - 2177556 | 48554.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





