Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_02223 | Not Available | Positive | 2145615 - 2145890 | 9929.94 |
| propionate catabolism operon regulatory protein prpr | HMPREF3040_02224 | Not Available | Negative | 2145991 - 2147577 | 58674.0 |
| methylisocitrate lyase | HMPREF3040_02225 | Not Available | Positive | 2147816 - 2148706 | 32123.5 |
| hypothetical protein | HMPREF3040_02226 | Not Available | Negative | 2148760 - 2148978 | 7939.54 |
| hypothetical protein | HMPREF3040_02227 | Not Available | Negative | 2148975 - 2149358 | 14843.3 |
| hypothetical protein | HMPREF3040_02228 | Not Available | Positive | 2149364 - 2149483 | 4440.34 |
| hypothetical protein | HMPREF3040_02229 | Not Available | Negative | 2149525 - 2150094 | 21807.1 |
| hypothetical protein | HMPREF3040_02230 | Not Available | Positive | 2150350 - 2150490 | 5110.59 |
| hypothetical protein | HMPREF3040_02231 | Not Available | Positive | 2150468 - 2150791 | 12662.4 |
| hemolysin expression-modulating domain protein | HMPREF3040_02232 | Not Available | Negative | 2150823 - 2150963 | 5367.46 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





