Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_02214 | Not Available | Positive | 2137492 - 2138478 | 35653.2 |
| putative sugar abc transporter, atp binding protein | HMPREF3040_02215 | Not Available | Positive | 2138527 - 2140011 | 54438.1 |
| branched-chain amino acid abc transporter, permease protein | HMPREF3040_02216 | Not Available | Positive | 2140004 - 2140975 | 34841.6 |
| branched-chain amino acid abc transporter, permease protein | HMPREF3040_02217 | Not Available | Positive | 2140972 - 2141928 | 33771.8 |
| putative chlorophyll synthesis pathway protein bchc | HMPREF3040_02218 | Not Available | Positive | 2142015 - 2143064 | 37983.6 |
| hypothetical protein | HMPREF3040_02219 | Not Available | Positive | 2143307 - 2144122 | 31786.4 |
| hypothetical protein | HMPREF3040_02220 | Not Available | Negative | 2144185 - 2144355 | 6790.1 |
| Trna-pseudo | Not Available | Not Available | Positive | 2144465 - 2144545 | Not Available |
| hypothetical protein | HMPREF3040_02221 | Not Available | Positive | 2144535 - 2144780 | 8848.02 |
| homoserine/threonine efflux protein | HMPREF3040_02222 | Not Available | Negative | 2144971 - 2145468 | 18352.7 |
Pathways
12702 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





