Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative protein matc | HMPREF3040_02174 | Not Available | Negative | 2094241 - 2094909 | 24502.3 |
| fimbrillin matb | HMPREF3040_02175 | Not Available | Negative | 2094967 - 2095554 | 20068.4 |
| transcriptional regulator, luxr family | HMPREF3040_02176 | Not Available | Negative | 2095629 - 2096171 | 21200.7 |
| hypothetical protein | HMPREF3040_02177 | Not Available | Positive | 2096644 - 2096934 | 10561.2 |
| ribosomal protein l36 | HMPREF3040_02178 | Not Available | Negative | 2097256 - 2097396 | 5466.94 |
| ribosomal protein l31 | HMPREF3040_02179 | Not Available | Negative | 2097396 - 2097662 | 10051.9 |
| oxidoreductase, fad/fmn-binding protein | HMPREF3040_02180 | Not Available | Negative | 2098599 - 2099705 | 40552.6 |
| dienelactone hydrolase domain protein | HMPREF3040_02181 | Not Available | Negative | 2099986 - 2100906 | 33221.6 |
| lysr substrate binding domain protein | HMPREF3040_02182 | Not Available | Positive | 2101063 - 2101989 | 34346.5 |
| lysr substrate binding domain protein | HMPREF3040_02183 | Not Available | Positive | 2102214 - 2103107 | 33299.3 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





