Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:antisense_rna | Not Available | Not Available | Positive | 7941 - 8050 | Not Available |
| Ncrna_class:other | Not Available | Not Available | Positive | 7944 - 8148 | Not Available |
| integron integrase | HMPREF3040_00013 | Not Available | Negative | 7364 - 8377 | 38399.4 |
| dihydrofolate reductase | HMPREF3040_00012 | Not Available | Positive | 8376 - 9008 | 23510.5 |
| Ncrna_class:other | Not Available | Not Available | Positive | 8543 - 8705 | Not Available |
| streptomycin 3-adenylyltransferase | HMPREF3040_00014 | Not Available | Positive | 9139 - 9927 | 29043.8 |
| Ncrna_class:other | Not Available | Not Available | Positive | 10113 - 10366 | Not Available |
| multidrug resistance protein, smr family | HMPREF3040_00015 | Not Available | Positive | 10133 - 10480 | 12332.6 |
| dihydropteroate synthase | HMPREF3040_00016 | Not Available | Positive | 10474 - 11313 | 30128.0 |
| Ncrna_class:other | Not Available | Not Available | Positive | 11395 - 11513 | Not Available |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





