Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_02164 | Not Available | Positive | 2083225 - 2083356 | 5004.19 |
| glutathionylspermidine synthetase/amidase | HMPREF3040_02165 | Not Available | Positive | 2083367 - 2085226 | 70475.7 |
| hypothetical protein | HMPREF3040_02166 | Not Available | Negative | 2085369 - 2085509 | 5050.05 |
| reverse transcriptase | HMPREF3040_02167 | Not Available | Positive | 2085873 - 2087123 | 48382.1 |
| tat pathway signal sequence domain protein | HMPREF3040_02168 | Not Available | Negative | 2087233 - 2087465 | 8142.75 |
| hypothetical protein | HMPREF3040_02169 | Not Available | Positive | 2087872 - 2088486 | 22968.1 |
| hypothetical protein | HMPREF3040_02170 | Not Available | Positive | 2088945 - 2089085 | 4868.75 |
| hypothetical protein | HMPREF3040_02171 | Not Available | Negative | 2089378 - 2090034 | 24632.1 |
| hypothetical protein | HMPREF3040_02172 | Not Available | Negative | 2090057 - 2091700 | 59937.1 |
| hypothetical protein | HMPREF3040_02173 | Not Available | Negative | 2091690 - 2094221 | 91482.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





