Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| snare-like domain protein | HMPREF3040_02144 | Not Available | Negative | 2067950 - 2068609 | 24116.3 |
| cystathionine beta-lyase | HMPREF3040_02145 | Not Available | Negative | 2068749 - 2070014 | 46052.2 |
| hypothetical protein | HMPREF3040_02146 | Not Available | Positive | 2070046 - 2070195 | 5749.03 |
| tonb-system energizer exbb | HMPREF3040_02147 | Not Available | Positive | 2070203 - 2070922 | 25759.3 |
| tonb system transport protein exbd | HMPREF3040_02148 | Not Available | Positive | 2070929 - 2071354 | 15527.9 |
| oxidoreductase, short chain dehydrogenase/reductase family protein | HMPREF3040_02149 | Not Available | Negative | 2071393 - 2072277 | 31489.7 |
| tigr00645 family protein | HMPREF3040_02150 | Not Available | Positive | 2072468 - 2072962 | 18642.3 |
| oxidoreductase, aldo/keto reductase family protein | HMPREF3040_02151 | Not Available | Negative | 2073002 - 2074042 | 38872.4 |
| carboxymethylenebutenolidase | HMPREF3040_02152 | Not Available | Positive | 2074160 - 2075086 | 34071.6 |
| hypothetical protein | HMPREF3040_02153 | Not Available | Positive | 2075205 - 2075492 | 10946.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





