Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iv, a subunit | HMPREF3040_02134 | Not Available | Positive | 2056199 - 2058457 | 83836.3 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | HMPREF3040_02135 | Not Available | Positive | 2058691 - 2059428 | 27424.7 |
| tat pathway signal sequence domain protein | HMPREF3040_02136 | Not Available | Positive | 2059503 - 2060915 | 51861.2 |
| putative radical sam protein ygiq | HMPREF3040_02137 | Not Available | Positive | 2061026 - 2063245 | 83558.6 |
| putative outer membrane lipoprotein | HMPREF3040_02138 | Not Available | Negative | 2063288 - 2063545 | 9513.58 |
| hypothetical protein | HMPREF3040_02139 | Not Available | Negative | 2063596 - 2064522 | 34985.0 |
| 2,5-diketo-d-gluconic acid reductase a | HMPREF3040_02140 | Not Available | Negative | 2064722 - 2065549 | 31111.4 |
| putative alcohol dehydrogenase 3 | HMPREF3040_02141 | Not Available | Negative | 2065654 - 2066817 | 42099.4 |
| hypothetical protein | HMPREF3040_02142 | Not Available | Positive | 2066868 - 2067014 | 5511.9 |
| transcriptional regulator arac protein | HMPREF3040_02143 | Not Available | Positive | 2067011 - 2067910 | 33817.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





