Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_02091 | Not Available | Positive | 2021150 - 2021425 | 10238.4 |
| adenylate cyclase | HMPREF3040_02093 | Not Available | Positive | 2021431 - 2022732 | 48391.6 |
| [glutamate--ammonia-ligase] adenylyltransferase | HMPREF3040_02094 | Not Available | Positive | 2022755 - 2025595 | 108439.0 |
| protein rfae, domain i | HMPREF3040_02095 | Not Available | Positive | 2025643 - 2027076 | 51069.6 |
| hypothetical protein | HMPREF3040_02098 | Not Available | Positive | 2027640 - 2027776 | 4942.18 |
| spfh/band 7/phb domain protein | HMPREF3040_02099 | Not Available | Negative | 2027855 - 2029516 | 60713.2 |
| hypothetical protein | HMPREF3040_02100 | Not Available | Negative | 2029543 - 2030172 | 23114.5 |
| glycogen synthesis protein glgs | HMPREF3040_02101 | Not Available | Positive | 2030441 - 2030641 | 7892.31 |
| hypothetical protein | HMPREF3040_02102 | Not Available | Negative | 2030684 - 2031748 | 38572.8 |
| hypothetical protein | HMPREF3040_02103 | Not Available | Negative | 2031750 - 2032121 | 14047.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





