Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter, dass family | HMPREF3040_02082 | Not Available | Negative | 2012909 - 2014372 | 52909.5 |
| l(+)-tartrate dehydratase subunit beta | HMPREF3040_02083 | Not Available | Negative | 2014420 - 2015025 | 22680.8 |
| tartrate dehydratase subunit alpha | HMPREF3040_02084 | Not Available | Negative | 2015022 - 2015933 | 32735.5 |
| hypothetical protein | HMPREF3040_02085 | Not Available | Negative | 2015987 - 2016109 | 4942.0 |
| lysr substrate binding domain protein | HMPREF3040_02086 | Not Available | Positive | 2016140 - 2017072 | 35316.6 |
| acyl-phosphate glycerol 3-phosphate acyltransferase | HMPREF3040_02087 | Not Available | Negative | 2017085 - 2017702 | 22194.7 |
| dihydroneopterin aldolase | HMPREF3040_02088 | Not Available | Positive | 2017807 - 2018175 | 13620.2 |
| undecaprenyl-diphosphatase uppp | HMPREF3040_02089 | Not Available | Positive | 2018265 - 2019086 | 29760.6 |
| multifunctional cca protein | HMPREF3040_02090 | Not Available | Negative | 2019267 - 2020505 | 46469.8 |
| putative signal transduction protein | HMPREF3040_02092 | Not Available | Negative | 2020569 - 2021189 | 23077.7 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





