Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative glycosyl hydrolase | HMPREF3040_02062 | Not Available | Negative | 1991157 - 1993508 | 88373.7 |
| hypothetical protein | HMPREF3040_02063 | Not Available | Negative | 1993525 - 1994418 | 33850.1 |
| amino acid permease | HMPREF3040_02064 | Not Available | Negative | 1994729 - 1996162 | 52177.7 |
| cryptic beta-d-galactosidase subunit beta | HMPREF3040_02065 | Not Available | Negative | 1996225 - 1996674 | 17457.6 |
| beta galactosidase small chain | HMPREF3040_02066 | Not Available | Negative | 1996671 - 1999763 | 117870.0 |
| transcriptional regulator, laci family | HMPREF3040_02067 | Not Available | Negative | 1999947 - 2000930 | 36212.4 |
| putative methionine--trna ligase, beta subunit | HMPREF3040_02068 | Not Available | Positive | 2001149 - 2001481 | 12316.1 |
| putrescine aminotransferase | HMPREF3040_02069 | Not Available | Negative | 2001523 - 2003013 | 53913.5 |
| aerotaxis receptor | HMPREF3040_02070 | Not Available | Positive | 2003320 - 2004840 | 55069.0 |
| transcriptional regulator, padr family | HMPREF3040_02071 | Not Available | Negative | 2004994 - 2005422 | 16127.3 |
Pathways
12799 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





