Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative n-acetylgalactosamine permease iic component 1 | HMPREF3040_02001 | Not Available | Negative | 1941003 - 1941782 | 27362.6 |
| pts system, mannose/fructose/sorbose family, iib component | HMPREF3040_02002 | Not Available | Negative | 1941793 - 1942302 | 18496.5 |
| d-tagatose-bisphosphate aldolase, class ii, non-catalytic subunit | HMPREF3040_02003 | Not Available | Negative | 1942289 - 1943551 | 46455.1 |
| hypothetical protein | HMPREF3040_02004 | Not Available | Negative | 1943583 - 1943738 | 5943.19 |
| transcriptional regulator, deor family | HMPREF3040_02005 | Not Available | Positive | 1943818 - 1944627 | 29574.3 |
| toxin-antitoxin system, toxin component, rele family | HMPREF3040_02006 | Not Available | Negative | 1944682 - 1945146 | 17837.2 |
| toxin-antitoxin system, antitoxin component, abrb family | HMPREF3040_02007 | Not Available | Negative | 1945146 - 1945481 | 12359.7 |
| galactarate dehydratase | HMPREF3040_02008 | Not Available | Negative | 1945630 - 1947201 | 56404.9 |
| hypothetical protein | HMPREF3040_02009 | Not Available | Negative | 1947248 - 1947367 | 4512.72 |
| hypothetical protein | HMPREF3040_02010 | Not Available | Negative | 1947430 - 1947555 | 4581.11 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





