Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucosamine-6-phosphate isomerase/6-phosphogluconolactonase | HMPREF3040_01991 | Not Available | Negative | 1933153 - 1933908 | 27725.5 |
| pts system, mannose/fructose/sorbose family, iid component | HMPREF3040_01992 | Not Available | Negative | 1933909 - 1934700 | 29003.1 |
| n-acetylgalactosamine permease iic component 1 | HMPREF3040_01993 | Not Available | Negative | 1934690 - 1935493 | 28646.5 |
| pts system, mannose/fructose/sorbose family, iib component | HMPREF3040_01994 | Not Available | Negative | 1935532 - 1936008 | 17640.3 |
| class ii aldolase, tagatose bisphosphate family | HMPREF3040_01995 | Not Available | Negative | 1936175 - 1937035 | 31295.4 |
| sugar isomerase, agas family | HMPREF3040_01996 | Not Available | Negative | 1937048 - 1938202 | 41784.8 |
| hypothetical protein | HMPREF3040_01997 | Not Available | Negative | 1938301 - 1938435 | 5023.02 |
| n-acetylglucosamine-6-phosphate deacetylase | HMPREF3040_01998 | Not Available | Negative | 1938553 - 1939686 | 40271.7 |
| pts system fructose iia component | HMPREF3040_01999 | Not Available | Negative | 1939683 - 1940117 | 15513.7 |
| pts system, mannose/fructose/sorbose family, iid component | HMPREF3040_02000 | Not Available | Negative | 1940135 - 1941013 | 31772.6 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





