Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannitol operon repressor | HMPREF3040_01961 | Not Available | Positive | 1908021 - 1908608 | 21991.4 |
| hypothetical protein | HMPREF3040_01962 | Not Available | Negative | 1908620 - 1908829 | 7995.76 |
| hypothetical protein | HMPREF3040_01963 | Not Available | Positive | 1909113 - 1909475 | 13696.8 |
| hypothetical protein | HMPREF3040_01964 | Not Available | Positive | 1910036 - 1910719 | 25489.9 |
| hep/hag repeat protein | HMPREF3040_01965 | Not Available | Positive | 1910763 - 1912121 | 44537.6 |
| hemagglutinin | HMPREF3040_01966 | Not Available | Positive | 1912012 - 1912910 | 30250.0 |
| hypothetical protein | HMPREF3040_01967 | Not Available | Positive | 1912911 - 1913036 | 4815.73 |
| tryptophan-specific transport protein | HMPREF3040_01968 | Not Available | Positive | 1913024 - 1914268 | 44397.3 |
| hypothetical protein | HMPREF3040_01969 | Not Available | Negative | 1914329 - 1914859 | 20200.7 |
| hypothetical protein | HMPREF3040_01970 | Not Available | Positive | 1915017 - 1915736 | 27322.9 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





