Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrate reductase molybdenum cofactor assembly chaperone | HMPREF3040_01901 | Not Available | Positive | 1847052 - 1847747 | 26225.1 |
| respiratory nitrate reductase, gamma subunit | HMPREF3040_01902 | Not Available | Positive | 1847744 - 1848424 | 26062.5 |
| phenazine biosynthesis protein, phzf family | HMPREF3040_01903 | Not Available | Positive | 1848503 - 1849396 | 32237.4 |
| Trna-pro | Not Available | Not Available | Positive | 1849626 - 1849702 | Not Available |
| arylsulfatase | HMPREF3040_01906 | Not Available | Negative | 1849794 - 1851485 | 63850.0 |
| hypothetical protein | HMPREF3040_01905 | Not Available | Positive | 1851475 - 1851597 | 4266.02 |
| oxalate/formate antiporter | HMPREF3040_01908 | Not Available | Negative | 1851809 - 1853017 | 42953.4 |
| hypothetical protein | HMPREF3040_01907 | Not Available | Positive | 1853011 - 1853190 | 6652.2 |
| hypothetical protein | HMPREF3040_01909 | Not Available | Negative | 1853246 - 1853944 | 25962.0 |
| dna-3-methyladenine glycosylase 1 | HMPREF3040_01910 | Not Available | Positive | 1853994 - 1854665 | 25050.8 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





