Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter, permease protein psta | HMPREF3040_01851 | Not Available | Positive | 1789731 - 1790621 | 32275.7 |
| phosphate abc transporter, atp-binding protein | HMPREF3040_01852 | Not Available | Positive | 1790712 - 1791485 | 29028.9 |
| phosphate transport system regulatory protein phou | HMPREF3040_01853 | Not Available | Positive | 1791500 - 1792225 | 27443.2 |
| hypothetical protein | HMPREF3040_01854 | Not Available | Positive | 1792638 - 1794058 | 54573.1 |
| hypothetical protein | HMPREF3040_01855 | Not Available | Negative | 1794150 - 1794808 | 25055.0 |
| ribonucleoside-diphosphate reductase, beta subunit | HMPREF3040_01856 | Not Available | Positive | 1794809 - 1796025 | 47089.0 |
| 2fe-2s iron-sulfur cluster binding domain protein | HMPREF3040_01857 | Not Available | Positive | 1796025 - 1796279 | 9275.25 |
| protein inaa | HMPREF3040_01858 | Not Available | Negative | 1796333 - 1796983 | 25285.5 |
| transporter, major facilitator family protein | HMPREF3040_01859 | Not Available | Negative | 1797064 - 1798254 | 42922.3 |
| lysr substrate binding domain protein | HMPREF3040_01860 | Not Available | Positive | 1798406 - 1799284 | 32651.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





