Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f1, epsilon subunit | HMPREF3040_01841 | Not Available | Positive | 1777978 - 1778397 | 15069.2 |
| hypothetical protein | HMPREF3040_01842 | Not Available | Positive | 1778405 - 1778527 | 4555.64 |
| udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase | HMPREF3040_01843 | Not Available | Positive | 1778748 - 1780118 | 49193.1 |
| glutamine-fructose-6-phosphate transaminase | HMPREF3040_01844 | Not Available | Positive | 1780280 - 1782109 | 66870.3 |
| fimbrial protein | HMPREF3040_01845 | Not Available | Positive | 1782417 - 1782989 | 19666.0 |
| gram-negative pili assembly chaperone domain protein | HMPREF3040_01846 | Not Available | Positive | 1783037 - 1783768 | 27235.4 |
| fimbrial usher protein | HMPREF3040_01847 | Not Available | Positive | 1783793 - 1786315 | 92691.5 |
| hypothetical protein | HMPREF3040_01848 | Not Available | Positive | 1786326 - 1787396 | 38470.2 |
| phosphate abc transporter, phosphate-binding protein psts | HMPREF3040_01849 | Not Available | Positive | 1787644 - 1788684 | 37081.9 |
| phosphate abc transporter, permease protein pstc | HMPREF3040_01850 | Not Available | Positive | 1788772 - 1789731 | 34123.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





