Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine 5-carboxymethylaminomethyl modification enzyme gida | HMPREF3040_01831 | Not Available | Positive | 1768317 - 1770206 | 69525.4 |
| 16s rrna methyltransferase gidb | HMPREF3040_01832 | Not Available | Positive | 1770270 - 1770893 | 23420.4 |
| atp synthase f0, i subunit | HMPREF3040_01833 | Not Available | Positive | 1771510 - 1771890 | 13632.5 |
| atp synthase f0, a subunit | HMPREF3040_01834 | Not Available | Positive | 1771899 - 1772714 | 30314.1 |
| atp synthase f0, c subunit | HMPREF3040_01835 | Not Available | Positive | 1772761 - 1773000 | 8256.71 |
| atp synthase f0, b subunit | HMPREF3040_01836 | Not Available | Positive | 1773062 - 1773532 | 17264.9 |
| atp synthase f1, delta subunit | HMPREF3040_01837 | Not Available | Positive | 1773547 - 1774080 | 19333.3 |
| atp synthase f1, alpha subunit | HMPREF3040_01838 | Not Available | Positive | 1774093 - 1775634 | 55225.4 |
| atp synthase f1, gamma subunit | HMPREF3040_01839 | Not Available | Positive | 1775685 - 1776548 | 31579.3 |
| atp synthase f1, beta subunit | HMPREF3040_01840 | Not Available | Positive | 1776575 - 1777957 | 50328.5 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





