Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_01811 | Not Available | Positive | 1750697 - 1750927 | 8855.6 |
| hypothetical protein | HMPREF3040_01812 | Not Available | Positive | 1751078 - 1751278 | 7693.24 |
| hypothetical protein | HMPREF3040_01813 | Not Available | Positive | 1751294 - 1751667 | 13639.4 |
| colicin e1 immunity protein | HMPREF3040_01814 | Not Available | Negative | 1751709 - 1752044 | 13269.4 |
| hypothetical protein | HMPREF3040_01815 | Not Available | Negative | 1752022 - 1752144 | 4633.86 |
| hypothetical protein | HMPREF3040_01816 | Not Available | Positive | 1752173 - 1752325 | 6145.84 |
| fcd domain protein | HMPREF3040_01817 | Not Available | Positive | 1752623 - 1753315 | 26091.5 |
| drug resistance mfs transporter, drug:h+ antiporter-2 family | HMPREF3040_01818 | Not Available | Positive | 1753338 - 1754765 | 51464.9 |
| ribose operon repressor | HMPREF3040_01819 | Not Available | Negative | 1754731 - 1755714 | 36310.7 |
| ribokinase | HMPREF3040_01820 | Not Available | Negative | 1755727 - 1756671 | 32893.1 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





