Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | JPH493 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1295780 bp
Thymine Count
1293439 bp
Guanine Count
1334851 bp
Cytosine Count
1317027 bp
Genome Length
5241097 bp
Protein-coding Genes
5329 genes
Non-Coding Genes
292 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF3040_01801 | Not Available | Negative | 1745910 - 1746104 | 7013.28 |
| mt-a70 protein | HMPREF3040_01802 | Not Available | Negative | 1746101 - 1746751 | 24210.3 |
| hypothetical protein | HMPREF3040_01803 | Not Available | Negative | 1746744 - 1747010 | 9855.05 |
| transcriptional regulator, alpa family | HMPREF3040_01804 | Not Available | Negative | 1747153 - 1747401 | 9545.42 |
| rect family protein | HMPREF3040_01805 | Not Available | Negative | 1747451 - 1748332 | 32113.0 |
| hypothetical protein | HMPREF3040_01806 | Not Available | Negative | 1748329 - 1749150 | 31618.4 |
| hypothetical protein | HMPREF3040_01807 | Not Available | Negative | 1749147 - 1749353 | 7975.82 |
| hypothetical protein | HMPREF3040_01808 | Not Available | Negative | 1749350 - 1749664 | 12032.4 |
| hypothetical protein | HMPREF3040_01809 | Not Available | Negative | 1749652 - 1749804 | 5945.08 |
| dna-binding helix-turn-helix protein | HMPREF3040_01810 | Not Available | Negative | 1749958 - 1750542 | 21917.0 |
Pathways
12367 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





